The detailed information of tRNA gene sequence


Sequence ID>SRA1005722
Genome IDSRR014586.198969
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 19
End posion on genome 94
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaggtaat
tRNA gene sequence 
CGCGAGATGGAGCAGTCGGTAGCTCGGTAGACTCATACTCTACAGGTCGCGGGTTCGAGT
CCCGCTCTCGCAACAA
Downstream region at tRNA end position 
aatttgagaa
Secondary structure (Cloverleaf model)
>SRA1005722	Met	CAT
                   t      ACAA aatttgagaa
                     C   A
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C G C C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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