The detailed information of tRNA gene sequence


Sequence ID>SRA1005724
Genome IDSRR014586.200376
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 261
End posion on genome 188
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
nnnnnnntaa
tRNA gene sequence 
TGGGGAGTCATCTAATGGTAGGATTCTTGGTTCTGAGCCAAGTCATCAAGGTTCGAATCC
TTGCACCCCAGCCA
Downstream region at tRNA end position 
tatattcgcg
Secondary structure (Cloverleaf model)
>SRA1005724	Gln	CTG
                   a      GCCA tatattcgcg
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A   A
                     G - C          T A
                    T     G T T C C     A
        A A        C      | | | | |     G
      T     T C T A       C A A G G     C
      G     + | | |                 T T
      G     G G A T
        T A        T     TCAT
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       G
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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