The detailed information of tRNA gene sequence


Sequence ID>SRA1005726
Genome IDSRR014586.200800
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 110
End posion on genome 186
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attaaaaaca
tRNA gene sequence 
AGCGGAGTAGAGTATTGGTAACTCGGTGGTCTCATAAACCACGTCACATGTGGGTTCGAG
TCCCATCTCCGCAACAA
Downstream region at tRNA end position 
caattagaga
Secondary structure (Cloverleaf model)
>SRA1005726	Met	CAT
                   a      ACAA caattagaga
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A C C C     A
        T A        A      + | | | |     G
      T     T G A G       G T G G G     C
      G     | | | |                 T T
      G     A C T C
        T A        G     GTCACAT
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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