The detailed information of tRNA gene sequence


Sequence ID>SRA1005727
Genome IDSRR014586.200864
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 226
End posion on genome 149
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtgaaccatt
tRNA gene sequence 
CTGGGTGTAGCTCAGTTTGGTTAGAGTACCGCACTTGGAATGCGGGGGCCGCTGGTTCAA
ATCCAGCCACCCAGACCA
Downstream region at tRNA end position 
tttttgtcgc
Secondary structure (Cloverleaf model)
>SRA1005727	Pro	TGG
                   t      ACCA tttttgtcgc
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G A C C     A
    T T G A        A      | | | | |     A
  T         C T C G       G C T G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          A     GGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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