The detailed information of tRNA gene sequence


Sequence ID>SRA1005728
Genome IDSRR014586.200864
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 141
End posion on genome 65
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccatttttgt
tRNA gene sequence 
CGCAGGTTAGAGAAGCGGCCTATCTTGCTCGGCTCATAACCGAGAGATCGCGGGTTCGAA
TCCCGCACCTGCTACCA
Downstream region at tRNA end position 
attttgtagg
Secondary structure (Cloverleaf model)
>SRA1005728	Met	CAT
                   t      ACCA attttgtagg
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A          T A
                    T     C G C C C     A
      C G A        A      | | | | |     G
    G       A G A G       G C G G G     C
    G       | | | +                 T T
    C       T C T T
      C T A        G     AGATC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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