The detailed information of tRNA gene sequence


Sequence ID>SRA1005735
Genome IDSRR014586.217400
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 181
End posion on genome 105
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaatcaac
tRNA gene sequence 
GGGTGTGTAGCTCAGTGGTAAGTAGCAGCGTGCTCATAACACGCAGGTCATTGGTTCAAT
CCCAATCACACCCACCA
Downstream region at tRNA end position 
aaacaactag
Secondary structure (Cloverleaf model)
>SRA1005735	Met	CAT
                   c      ACCA aaacaactag
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     G - C          C T
                    T     T A A C C     A
      T G A        A      | | | | |     A
    G       C T C G       A T T G G     C
    G         | | |                 T T
    T       T A G C
      A A G        A     AGGTC
                    G - C
                    C - G
                    G - C
                    T - A
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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