The detailed information of tRNA gene sequence


Sequence ID>SRA1005740
Genome IDSRR014586.224245
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 218
End posion on genome 143
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ggcaccacac
tRNA gene sequence 
GCCGACATAGTGATAATGGTCAGCACGGGTTCCTGGTACGAACCCAGAGGGAGTTCAATT
CTTCCTGTCGGCTCCA
Downstream region at tRNA end position 
tcatggttgt
Secondary structure (Cloverleaf model)
>SRA1005740	Thr	GGT
                   c      TCCA tcatggttgt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T T
                    T     C C T T C     A
      A A T        A      | | + | |     A
    T       A G T G       G G G A G     C
    G         | | |                 T T
    G       G C A C
      T C A        G     CAGA
                    G - C
                    G - C
                    T - A
                    T - A
                    C - G
                  C       C
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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