The detailed information of tRNA gene sequence


Sequence ID>SRA1005760
Genome IDSRR014587.11816
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 68
End posion on genome 157
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaccaattc
tRNA gene sequence 
GGTGACGTGGGTGAGTGGCTGAAACCACAGCCCTGCTAAGGCTGCATACGGGAAACTGTA
TCGAGGGTTCGAATCCCTCCGTCACCGCCA
Downstream region at tRNA end position 
tttattgaat
Secondary structure (Cloverleaf model)
>SRA1005760	Ser	GCT
                   c      GCCA tttattgaat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACGGGAAACTGTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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