The detailed information of tRNA gene sequence


Sequence ID>SRA1005769
Genome IDSRR014587.79433
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 150
End posion on genome 239
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaacaattc
tRNA gene sequence 
GGTGACGTGGGTGAGTGGCTGAAACCACAGCCCTGCTAAGGCTGCATACGGGAAACTGTA
TCGAGGGTTCGAATCCCTCCGTCACCGCCA
Downstream region at tRNA end position 
tttatcaaat
Secondary structure (Cloverleaf model)
>SRA1005769	Ser	GCT
                   c      GCCA tttatcaaat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACGGGAAACTGTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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