The detailed information of tRNA gene sequence


Sequence ID>SRA1005795
Genome IDSRR014587.159171
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 158
End posion on genome 241
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
accatttttt
tRNA gene sequence 
GCGGATGTGATGTAATTGGTAGCCATGTCGGTCTTAGAAGCCGATGCCTTGAGCGTGAGA
GTTCGAGTCTCTCCATCCGCACCA
Downstream region at tRNA end position 
acttcttatt
Secondary structure (Cloverleaf model)
>SRA1005795	Leu	TAG
                   t      ACCA acttcttatt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C T C T C     A
      T A A        G      | | | | |     G
    T       T G T A       G A G A G     C
    G         | | |                 T T
    G       C C A T
      T A G        G     TGCCTTGAGCGT
                    T - A
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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