The detailed information of tRNA gene sequence


Sequence ID>SRA1005798
Genome IDSRR014587.168039
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 135
End posion on genome 207
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aggagatcgc
tRNA gene sequence 
GGGGGCGTAGCTCAGTTGGGAGAGCGCCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGAAC
CCGATCGCCTCCAtaa
Downstream region at tRNA end position 
gggcaaggcg
Secondary structure (Cloverleaf model)
>SRA1005798	Ala	TGC
                   c      Ataa gggcaaggcg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          C A
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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