The detailed information of tRNA gene sequence


Sequence ID>SRA1005817
Genome IDSRR014587.221925
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 7
End posion on genome 83
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nnnncattct
tRNA gene sequence 
AGGTGTATAGCTCAGTTGGTTAGAGCGCTACGTTGACATCGTAGAGGTCTCCAGTTCGAG
TCTGGATATGCCTACCA
Downstream region at tRNA end position 
aaattaactg
Secondary structure (Cloverleaf model)
>SRA1005817	Val	GAC
                   t      ACCA aaattaactg
                     A - T
                     G - C
                     G - C
                     T + G
                     G + T
                     T - A
                     A - T          T G
                    T     A G G T C     A
      T G A        A      | | | | |     G
    T       C T C G       T C C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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