The detailed information of tRNA gene sequence


Sequence ID>SRA1005819
Genome IDSRR014587.228453
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 163
End posion on genome 238
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gcaccgtcac
tRNA gene sequence 
AGGGGTATCGCCAAGTTGGTAAGGCACCAGGTTTTGATCCTGGCATTCGTTGGTTCGAGT
CCAGCTACCCCTGCCA
Downstream region at tRNA end position 
ttttctttac
Secondary structure (Cloverleaf model)
>SRA1005819	Gln	TTG
                   c      GCCA ttttctttac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C G A C C     A
      T G A        C      | + | | |     G
    T       A C C G       G T T G G     C
    G         | | |                 T T
    G       A G G C
      T A          A     CATTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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