The detailed information of tRNA gene sequence


Sequence ID>SRA1005821
Genome IDSRR014587.235670
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 189
End posion on genome 114
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcccaaaaat
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGTAGAGCACTTGCATGGCATGCAAGGGGTCAGCGGTTCGACT
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
ctattaagtc
Secondary structure (Cloverleaf model)
>SRA1005821	Ala	GGC
                   t      ACCA ctattaagtc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T C
                    T     T C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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