The detailed information of tRNA gene sequence


Sequence ID>SRA1005823
Genome IDSRR014587.236731
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 84
End posion on genome 160
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctatcctttc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACAGTTCAAG
TCTGTGTGGGCCCACCA
Downstream region at tRNA end position 
aatttaaccc
Secondary structure (Cloverleaf model)
>SRA1005823	Met	CAT
                   c      ACCA aatttaaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G T G T C     A
      T G A        A      | | | | |     A
    T       C T C G       C A C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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