The detailed information of tRNA gene sequence


Sequence ID>SRA1005828
Genome IDSRR014587.246960
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 205
End posion on genome 131
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgcccacaac
tRNA gene sequence 
GGGGCTATAGCTCAGGCGGTTAGAGCGCTTCACTGATAATGAAGAGGTCCCAGGTTCAAG
TCCTGGTAACCCCACac
Downstream region at tRNA end position 
gttcctcatc
Secondary structure (Cloverleaf model)
>SRA1005828	Ile	GAT
                   c      ACac gttcctcatc
                     G - C
                     G - C
                     G - C
                     G - C
                     C   A
                     T - A
                     A - T          T G
                    T     G G T C C     A
      G G A        A      | | | | |     A
    C       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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