The detailed information of tRNA gene sequence


Sequence ID>SRA1005829
Genome IDSRR014587.246960
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 117
End posion on genome 42
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttcctcatcc
tRNA gene sequence 
GGGGCCTTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAAT
CTCCTAGGCTCCACAA
Downstream region at tRNA end position 
agtaacgtag
Secondary structure (Cloverleaf model)
>SRA1005829	Ala	TGC
                   c      ACAA agtaacgtag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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