The detailed information of tRNA gene sequence


Sequence ID>SRA1005831
Genome IDSRR014587.261243
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 102
End posion on genome 27
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtaaagcacc
tRNA gene sequence 
GCCGGCTTAGCTCAGTTGGTAGAGCACCTGATTTGTAATCAGGGGGCCACGGGTTCGAAT
CCTGTAGCCGGCACCA
Downstream region at tRNA end position 
ttttcgtcct
Secondary structure (Cloverleaf model)
>SRA1005831	Thr	TGT
                   c      ACCA ttttcgtcct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     T G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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