The detailed information of tRNA gene sequence


Sequence ID>SRA1005832
Genome IDSRR014587.269062
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 223
End posion on genome 147
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ttccaaatac
tRNA gene sequence 
GCACCTGTAGCTCAGCTGGATAGAGTATTGCCCTCCGAAGGCAAGGGTCGTGGGTTCAAA
TCCCGCCAGGTGCGCCA
Downstream region at tRNA end position 
tctcccccgt
Secondary structure (Cloverleaf model)
>SRA1005832	Arg	CCG
                   c      GCCA tctcccccgt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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