The detailed information of tRNA gene sequence


Sequence ID>SRA1005846
Genome IDSRR014588.24301
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 96
End posion on genome 9
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttaagtcgc
tRNA gene sequence 
GGAGAGATGACAGAGCGGGAATGTCTCGGCTTGCTAAGCCGAAGGCGTCCGAAAGGACGC
GAAGGTTCGATCCCTTCTCTCTCCGCCA
Downstream region at tRNA end position 
cggaacagnn
Secondary structure (Cloverleaf model)
>SRA1005846	Ser	GCT
                   c      GCCA cggaacagnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          C T
                    T     C T T C C     A
        G A        G      | | | | |     G
      C     G A C A       G A A G G     C
      G       | | |                 T T
      G     A T G T
        G A        C     AGGCGTCCGAAAGGACGC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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