The detailed information of tRNA gene sequence


Sequence ID>SRA1005854
Genome IDSRR014588.75334
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 81
End posion on genome 5
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acagtaggac
tRNA gene sequence 
GCACCCATAGCTCAGTAGGTTAGAGCAGCTGACTCATAATCAGCGGGTCCAAGGTTCGAA
TCCTTGTGGGTGCACGA
Downstream region at tRNA end position 
tttcnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005854	Met	CAT
                   c      ACGA tttcnnnnnn
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G T T C C     A
      T G A        A      | | | | |     G
    A       C T C G       C A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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