The detailed information of tRNA gene sequence


Sequence ID>SRA1005859
Genome IDSRR014588.119819
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 103
End posion on genome 28
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
nnnnncctac
tRNA gene sequence 
TGGCGTATAGTGTAATTGGCAACACGCTTGGCTTTGAACCAAGAGACATGGGGTTCAAAT
CCCTCTACGCCATCTA
Downstream region at tRNA end position 
ccctcctgta
Secondary structure (Cloverleaf model)
>SRA1005859	Gln	TTG
                   c      TCTA ccctcctgta
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          T A
                    T     C T C C C     A
      T A A        A        + | | |     A
    T       T G T G       T G G G G     C
    G       | | | |                 T T
    G       A C A C
      C A          G     AGACA
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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