The detailed information of tRNA gene sequence


Sequence ID>SRA1005864
Genome IDSRR014588.136200
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 117
End posion on genome 45
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnnnnntaa
tRNA gene sequence 
GCCGCCATCGTCTATCGGTTAAGACACTAGGCTTTCAACCTAGAGAATAGGGTTCAATTC
CCTGTAGCGGTACtt
Downstream region at tRNA end position 
tgtctggtga
Secondary structure (Cloverleaf model)
>SRA1005864	Glu	TTC
                   a      ACtt tgtctggtga
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     C   A
                     A - T          T T
                    T     G T C C C     A
      C T A        C      + | | | |     A
    G       T C T G       T A G G G     C
    G       | | | |                 T T
    T       A G A C
      T A          A     AGAA
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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