The detailed information of tRNA gene sequence


Sequence ID>SRA1005867
Genome IDSRR014588.157402
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 107
End posion on genome 32
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnncgacctt
tRNA gene sequence 
GGCCAGATAGCTCAGTTGGTAGAGCAGCGGACTGAAAATCCGCGTGTCGGCGGTTCGACT
CCGTCCCTGGCCACCA
Downstream region at tRNA end position 
atttctttta
Secondary structure (Cloverleaf model)
>SRA1005867	Phe	GAA
                   t      ACCA atttctttta
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     A   C          T C
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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