The detailed information of tRNA gene sequence


Sequence ID>SRA1005868
Genome IDSRR014588.174834
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 32
End posion on genome 106
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
acaccaattt
tRNA gene sequence 
TGTAGGGTGGTGTAATGGTAACACGTCGGGCTCGCAACCCGGAGACTGTTGGTTCAATTC
CAACCCCTGCTTCCC
Downstream region at tRNA end position 
cccgtccggg
Secondary structure (Cloverleaf model)
>SRA1005868	Ala	CGC
                   t      TCCC cccgtccggg
                     T   T
                     G - C
                     T + G
                     A - T
                     G - C
                     G - C
                     G - C          T T
                    T     C A A C C     A
        A A        G      | | | | |     A
      T     T G T G       G T T G G     C
      G     | | | |                 T T
      G     A C A C
        T A        G     AGACT
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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