The detailed information of tRNA gene sequence


Sequence ID>SRA1005887
Genome IDSRR014589.15141
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 263
End posion on genome 179
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gcgtcaccga
tRNA gene sequence 
GCCCTCATGATGGAATGGTAGACATAACGCACTTAAAATGCGTCGTTCGTTACTGAACGT
GCGAGTTCGAATCTCGCTGAGGGTAttt
Downstream region at tRNA end position 
agttttattt
Secondary structure (Cloverleaf model)
>SRA1005887	Leu	TAA
                   a      Attt agttttattt
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C G C T C     A
      T A A        G      | | | | |     G
    G       G G T A       G C G A G     C
    G         | | |                 T T
    T       A C A T
      A G          A     CGTTCGTTACTGAACGT
                    A - T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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