The detailed information of tRNA gene sequence


Sequence ID>SRA1005906
Genome IDSRR014589.35126
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 199
End posion on genome 272
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctaaaataat
tRNA gene sequence 
GTAGGTGTGGTGAAATGGTATCATTACGGTCTCCAAAACCGCAGTTTGAGGTTCGAATCC
TTACACCTATGCAA
Downstream region at tRNA end position 
cccggcgaaa
Secondary structure (Cloverleaf model)
>SRA1005906	Trp	CCA
                   t      GCAA cccggcgaaa
                     G + T
                     T - A
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     A T T C C     A
        A A        G      | + | | |     G
      T     A G T G       T G A G G     C
      G     | | | +                 T T
      G     T C A T
        T A        T     AGTT
                    A   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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