The detailed information of tRNA gene sequence


Sequence ID>SRA1005915
Genome IDSRR014589.42015
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 202
End posion on genome 125
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atattacttT
tRNA gene sequence 
CGGGACGTAGCTCAGCTTGGTAGAGCACCTGCTTTGGGAGCAGGGGGTCGCATGTTCAAA
TCGTGTCGTCCCGATCA
Downstream region at tRNA end position 
tagtaaagca
Secondary structure (Cloverleaf model)
>SRA1005915	Pro	TGG
                   T      ATCA tagtaaagca
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T G C     A
      C G A        A      + | | + |     A
    T       C T C G       G C A T G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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