The detailed information of tRNA gene sequence


Sequence ID>SRA1005927
Genome IDSRR014589.54462
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 46
End posion on genome 133
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagcaaaaac
tRNA gene sequence 
GGAAAGTTGGCAGAGCGGTTGAATGCGGCAGTCTTGAAAACTGTTTTAGTGAAAGCTAAC
CGGGGTTCGAATCCCTGACTTTCCGCCA
Downstream region at tRNA end position 
aaatggccct
Secondary structure (Cloverleaf model)
>SRA1005927	Ser	TGA
                   c      GCCA aaatggccct
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TTTAGTGAAAGCTAAC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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