The detailed information of tRNA gene sequence


Sequence ID>SRA1005935
Genome IDSRR014589.61672
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 116
End posion on genome 41
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttaataaacg
tRNA gene sequence 
AGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGATC
CCGCTTGGCTCCACCA
Downstream region at tRNA end position 
tattccctga
Secondary structure (Cloverleaf model)
>SRA1005935	Ala	TGC
                   g      ACCA tattccctga
                     A   C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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