The detailed information of tRNA gene sequence


Sequence ID>SRA1005941
Genome IDSRR014589.63240
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 131
End posion on genome 207
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatctatga
tRNA gene sequence 
AGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAA
TCCTGCCCCCGNAACCC
Downstream region at tRNA end position 
caatgatgcg
Secondary structure (Cloverleaf model)
>SRA1005941	Met	CAT
                   a      ACCC caatgatgcg
                     A   A
                     G   N
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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