The detailed information of tRNA gene sequence


Sequence ID>SRA1005956
Genome IDSRR014589.72864
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 277
End posion on genome 190
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagcaaaaac
tRNA gene sequence 
GGAAAGTTGGCAGAGCGGTTGAATGCGGCAGTCTTGAAAACTGTTTTAGTGAAAGCTAAC
CGGGGTTCGAATCCCTGACTTTCCGCCA
Downstream region at tRNA end position 
aaatggccct
Secondary structure (Cloverleaf model)
>SRA1005956	Ser	TGA
                   c      GCCA aaatggccct
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TTTAGTGAAAGCTAAC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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