The detailed information of tRNA gene sequence


Sequence ID>SRA1005995
Genome IDSRR014589.95857
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 121
End posion on genome 45
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgttcaatgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
aactctttct
Secondary structure (Cloverleaf model)
>SRA1005995	Met	CAT
                   t      ACCA aactctttct
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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