The detailed information of tRNA gene sequence


Sequence ID>SRA1006002
Genome IDSRR014589.98282
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 237
End posion on genome 162
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cattatccca
tRNA gene sequence 
TGAGGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATC
CCGTCAGCCTCCACCA
Downstream region at tRNA end position 
tactgcccaa
Secondary structure (Cloverleaf model)
>SRA1006002	Val	TAC
                   a      ACCA tactgcccaa
                     T   C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A          C T
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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