The detailed information of tRNA gene sequence


Sequence ID>SRA1006004
Genome IDSRR014589.98471
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 181
End posion on genome 258
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
catattactT
tRNA gene sequence 
CGGGACGTAGCTCAGCTTGGTAGAGCACCTGCTTTGGGAGCAGGGGGTCGCATGTTCAAA
TCGTGTCGTCCCGATCA
Downstream region at tRNA end position 
tagtaaannn
Secondary structure (Cloverleaf model)
>SRA1006004	Pro	TGG
                   T      ATCA tagtaaannn
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T G C     A
      C G A        A      + | | + |     A
    T       C T C G       G C A T G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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