The detailed information of tRNA gene sequence


Sequence ID>SRA1006005
Genome IDSRR014589.100149
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 23
End posion on genome 98
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
attatcccat
tRNA gene sequence 
GGAGGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGCGGTTCGATC
CCGTCAGCCTCCACCA
Downstream region at tRNA end position 
tactgcccaa
Secondary structure (Cloverleaf model)
>SRA1006005	Val	TAC
                   t      ACCA tactgcccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A          C T
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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