The detailed information of tRNA gene sequence


Sequence ID>SRA1006006
Genome IDSRR014589.100149
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 182
End posion on genome 258
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgttcaatgt
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
aactctttnn
Secondary structure (Cloverleaf model)
>SRA1006006	Met	CAT
                   t      ACCA aactctttnn
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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