The detailed information of tRNA gene sequence


Sequence ID>SRA1006055
Genome IDSRR014589.152835
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 66
End posion on genome 142
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttttaccctt
tRNA gene sequence 
AGGTCTGTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGCAGTTCAAA
TCTGCCCAGACCTACCA
Downstream region at tRNA end position 
attttggttg
Secondary structure (Cloverleaf model)
>SRA1006055	Ile	GAT
                   t      ACCA attttggttg
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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