The detailed information of tRNA gene sequence


Sequence ID>SRA1006079
Genome IDSRR014589.172987
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 203
End posion on genome 114
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ataaatacaT
tRNA gene sequence 
GGAGAAGTGTCCGAGCGGCCGAAGGAGCACGATTGGAAATCGTGTAGGCGTCACAAGCGT
CTCGAGGGTTCGAATCCCTCCTTCTCCGTtt
Downstream region at tRNA end position 
ctttagataa
Secondary structure (Cloverleaf model)
>SRA1006079	Ser	GGA
                   T      GTtt ctttagataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAGGCGTCACAAGCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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