The detailed information of tRNA gene sequence


Sequence ID>SRA1006087
Genome IDSRR014589.177294
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 5
End posion on genome 81
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnaaaa
tRNA gene sequence 
GGGCTGTTAGTTCAGTTGGCTAGAACGTCTGATTTGCATTCAGAAGGTCATCGGTTCGAC
TCCGGTACGGTCCACAA
Downstream region at tRNA end position 
aatgcttctt
Secondary structure (Cloverleaf model)
>SRA1006087	Ala	TGC
                   a      ACAA aatgcttctt
                     G - C
                     G - C
                     G + T
                     C - G
                     T + G
                     G - C
                     T - A          T C
                    T     T G G C C     A
      T G A        A      | + | | |     G
    T       C T T G       A T C G G     C
    G       | | | |                 T T
    G       G A A C
      C T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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