The detailed information of tRNA gene sequence


Sequence ID>SRA1006089
Genome IDSRR014589.177647
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 62
End posion on genome 138
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tacacagtgt
tRNA gene sequence 
GGAGCTGTGGTGTAGTGGCCTAACATGCCTGCCTGTCACGCAGGAGACCGCGGGTTCGAA
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
ttttttcaaa
Secondary structure (Cloverleaf model)
>SRA1006089	Asp	GTC
                   t      GCCA ttttttcaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGACC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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