The detailed information of tRNA gene sequence


Sequence ID>SRA1006100
Genome IDSRR014589.188561
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 24
End posion on genome 115
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agataaattT
tRNA gene sequence 
GGAGAGATACCCAAGTGGCTATAAGGGGACCCTCTGCTAAGGGGTTAGACTGCGTAAGTG
GTGCGAGGGTTCGAATCCCTCTCTCTCCGTCg
Downstream region at tRNA end position 
gtaaattttt
Secondary structure (Cloverleaf model)
>SRA1006100	Ser	GCT
                   T      GTCg gtaaattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A C C C       G A G G G     C
  C           | | |                 T T
  T         A G G G
    A T A          G     TAGACTGCGTAAGTGGTGC
                    A - T
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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