The detailed information of tRNA gene sequence


Sequence ID>W1810464040
Genome IDQAAA01000015
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodovulum imhoffii DSM 18064 [QAAA]
Start position on genome 58839
End posion on genome 58750
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagcgtcgcc
tRNA gene sequence 
GGAGATGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTAGGCGGGAAACCGTC
TCGAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
cttgcccccg
Secondary structure (Cloverleaf model)
>W1810464040	Ser	GCT
                   c      GCCA cttgcccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T + G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAAACCGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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