The detailed information of tRNA gene sequence


Sequence ID>SRA1006140
Genome IDSRR016610.51063
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 21
End posion on genome 97
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
agtttcagtg
tRNA gene sequence 
GTGGCTGTAGCTCAGTTGGTTAGAGTACCGGATTGTGATTCCGGTGGTCGGGGGTTCGAA
TCCCCTCAGCCACCCCA
Downstream region at tRNA end position 
ctgattcaac
Secondary structure (Cloverleaf model)
>SRA1006140	His	GTG
                   g      CCCA ctgattcaac
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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