The detailed information of tRNA gene sequence


Sequence ID>SRA1006144
Genome IDSRR016610.56209
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 84
End posion on genome 157
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
tatcgatcaa
tRNA gene sequence 
GCAGTCGTAGTATAGTTTGGTTATTATTCTAGCTTGCCAAGTTAGTGACCCGGGTTCAAA
TCCCGGCGACTGCAttg
Downstream region at tRNA end position 
ttttcgaaaa
Secondary structure (Cloverleaf model)
>SRA1006144	Gly	GCC
                   a      Attg ttttcgaaaa
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T T G A        A      | | | | |     A
  T         T A T G       C C G G G     C
  G           | | +                 T T
  G         T T A T
    T T A          T     TGAC
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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