The detailed information of tRNA gene sequence


Sequence ID>SRA1006145
Genome IDSRR016610.68054
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 142
End posion on genome 68
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tagtgatctt
tRNA gene sequence 
GGCGCGATAGCAAAGCGGTTACTGCCCCGGATTGCAAATCCGGTTAGACCAGTTCGACTC
TGGTTCGCGCCTCCA
Downstream region at tRNA end position 
aaaattcatt
Secondary structure (Cloverleaf model)
>SRA1006145	Cys	GCA
                   t      TCCA aaaattcatt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     A - T          T C
                    T     T G G T C     A
      C G A        A      | | | | |     G
    G       A A C G       A C C A G     C
    G         | | |                 T T
    T       C T G C
      T A          C     TTAG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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