The detailed information of tRNA gene sequence


Sequence ID>SRA1006154
Genome IDSRR016610.104274
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tttttatttt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTAGAGCGTCTGCCTTGCACGTAGAAGGTTCGCTGGTTCGAT
CCCAGTCGCCTCCACCA
Downstream region at tRNA end position 
aaaataaaag
Secondary structure (Cloverleaf model)
>SRA1006154	Ala	TGC
                   t      ACCA aaaataaaag
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     G - C          C T
                    T     T G A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTTC
                    T - A
                    C - G
                    T - A
                    G + T
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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