The detailed information of tRNA gene sequence


Sequence ID>SRA1006155
Genome IDSRR016610.106656
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 137
End posion on genome 213
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gtgacgacct
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGCAGAGCGGCGGGCTCTTAACCCGTAGGTCCCGGGTTCAAA
TCCCGGCCGGCCCGCCA
Downstream region at tRNA end position 
cgggaaaaac
Secondary structure (Cloverleaf model)
>SRA1006155	Lys	CTT
                   t      GCCA cgggaaaaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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