The detailed information of tRNA gene sequence


Sequence ID>SRA1006159
Genome IDSRR016610.116372
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 104
End posion on genome 178
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tgggaccttt
tRNA gene sequence 
GGGGCGCTAATGCTAATGGGAACATACCTGTTTTGCAAGCAGGAATTCGGGGTTCGATTC
CCCGGCGCTCCACCA
Downstream region at tRNA end position 
taccaactga
Secondary structure (Cloverleaf model)
>SRA1006159	Ala	TGC
                   t      ACCA taccaactga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    T     G C C C C     A
      A A T        A      | | | | |     G
    T       C G T A       C G G G G     C
    G         | | |                 T T
    G       A C A T
      G A          A     AATT
                    C - G
                    C - G
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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