The detailed information of tRNA gene sequence


Sequence ID>SRA1006176
Genome IDSRR016610.148006
Search identical group
Phylum/ClassMetagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749)
Species
Start position on genome 239
End posion on genome 163
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
agccttcgcg
tRNA gene sequence 
GCGACCGTAGTTCAATTGGTTAGAGTGCCGGCTTGTGATGCCGGAAGTTGCGGGTTCAAG
TCCCGTCGGTCGCCCCA
Downstream region at tRNA end position 
taatttcggc
Secondary structure (Cloverleaf model)
>SRA1006176	His	GTG
                   g      CCCA taatttcggc
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       C T T G       G C G G G     C
    G       | | + +                 T T
    G       G A G T
      T T A        G     AAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       T
                  T       A
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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